BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037F03SP1|AL430412
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1126 1713 0.0
>3x_Contig1126
Length = 5421
Score = 1713 bits (864), Expect = 0.0
Identities = 871/874 (99%)
Strand = Plus / Minus
Query: 1 tcttccatgatatcacaaggatgtaaaatatcagatctcgtaattggaatttcaacatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4237 tcttccatgatatcacaaggatgtaaaatatcagatctcgtaattggaatttcaacatgt 4178
Query: 61 aagatgttttggtcgtcagaggaaggtgtagctttcaacgacatctttttcaagttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4177 aagatgttttggtcgtcagaggaaggtgtagctttcaacgacatctttttcaagttcttt 4118
Query: 121 gagatctcttctggggataaggttaggcctagacaagaattgatgtaatcgaccttgacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4117 gagatctcttctggggataaggttaggcctagacaagaattgatgtaatcgaccttgacg 4058
Query: 181 tccataatttttggagtgaaatttggggttactctagattgattgttgtgttcagaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4057 tccataatttttggagtgaaatttggggttactctagattgattgttgtgttcagaaaca 3998
Query: 241 atttccactggctccacggtgaattggtcttcacaataacgggagaacatagcaacgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3997 atttccactggctccacggtgaattggtcttcacaataacgggagaacatagcaacgatt 3938
Query: 301 tggtccaagacaacttcggacttggttctatcggttgcagtaacttcgataaaaatattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3937 tggtccaagacaacttcggacttggttctatcggttgcagtaacttcgataaaaatattc 3878
Query: 361 ttggtgttcagagaaattttagagtgttcagagttaatcaaaggaggcagagaacaaacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3877 ttggtgttcagagaaattttagagtgttcagagttaatcaaaggaggcagagaacaaacg 3818
Query: 421 acattattgtcatcgtagatgaagngnaaaaacaggggaatcttcgataatgtgaacgaa 480
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 3817 acattattgtcatcgtagatgaagtgtaaaaacaggggaatcttcgataatgtgaacgaa 3758
Query: 481 acggcccaagttgttcttttgttctggttgtttgtacaattcgattaactctgcaccatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3757 acggcccaagttgttcttttgttctggttgtttgtacaattcgattaactctgcaccatc 3698
Query: 541 gtattccttactttgatttaagggcacaaacttgatgtcagttggcttttcagctctgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3697 gtattccttactttgatttaagggcacaaacttgatgtcagttggcttttcagctctgta 3638
Query: 601 gtggaaaggacctttaatggtatccaaatcgtgtgttccaatggcaactaaagttctgtt 660
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3637 gtggaaaggacctttaatggtatccaaatcgtgtgtaccaatggcaactaaagttctgtt 3578
Query: 661 tctacacaagtttgagtgtaacttatcttgaagagaaatgaacgatgcatagttggcttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3577 tctacacaagtttgagtgtaacttatcttgaagagaaatgaacgatgcatagttggcttc 3518
Query: 721 ggtgaatgtaacatttcttaagatggcagcacaagcgtaacttctaatttgagttgtaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3517 ggtgaatgtaacatttcttaagatggcagcacaagcgtaacttctaatttgagttgtaga 3458
Query: 781 ttcttcaatgattaacttggtagttggtttgctcaacttatactctggagcttcaacgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3457 ttcttcaatgattaacttggtagttggtttgctcaacttatactctggagcttcaacgtt 3398
Query: 841 acccaaaaattcattcaaagattgagcgatacct 874
||||||||||||||||||||||||||||||||||
Sbjct: 3397 acccaaaaattcattcaaagattgagcgatacct 3364
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6856
Number of Sequences: 1807
Number of extensions: 6856
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)